Msp_g08269


Description : not classified & original description: none


Gene families : OG0001752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08269

Target Alias Description ECC score Gene Family Method Actions
AT4G26485 No alias Domain of unknown function (DUF2431) 0.02 OrthoFinder output from all 47 species
Dac_g20019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_11799 No alias Heavy metal-associated isoprenylated plant protein 41... 0.03 OrthoFinder output from all 47 species
Gb_13168 No alias Heavy metal-associated isoprenylated plant protein 41... 0.03 OrthoFinder output from all 47 species
MA_8690274g0010 No alias Heavy metal-associated isoprenylated plant protein 41... 0.03 OrthoFinder output from all 47 species
Pnu_g28710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEA Interproscan
BP GO:0070475 rRNA base methylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019446 BMT5-like 16 186
No external refs found!