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  5. Msp_g08178

Msp_g08178


Description : substrate adaptor of SCF E3 ubiquitin ligase *(AFR) & original description: none


Gene families : OG0004179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08178
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT1G30090 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g23753 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene43022.t1 Aspi01Gene43022 substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.04 OrthoFinder output from all 47 species
Ehy_g17635 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.04 OrthoFinder output from all 47 species
MA_39207g0010 No alias F-box/kelch-repeat protein At1g30090 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g00934 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 231 277
IPR001810 F-box_dom 92 129
No external refs found!