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  5. Msp_g08109

Msp_g08109


Description : accessory component *(ATG13) of ATG1-13 autophagosome assembly control complex & original description: none


Gene families : OG0001611 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001611_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00026320 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG1-13... 0.03 OrthoFinder output from all 47 species
Adi_g010434 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Adi_g056008 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Aev_g14640 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Aop_g10595 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.04 OrthoFinder output from all 47 species
Ceric.07G005400.1 Ceric.07G005400 accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Ceric.29G066100.1 Ceric.29G066100 accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Cre16.g659000 No alias Vesicle trafficking.autophagosome formation.ATG1-13... 0.02 OrthoFinder output from all 47 species
Dcu_g11547 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
GSVIVT01026577001 No alias Vesicle trafficking.autophagosome formation.ATG1-13... 0.03 OrthoFinder output from all 47 species
Gb_20559 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.05 OrthoFinder output from all 47 species
LOC_Os02g43040.1 LOC_Os02g43040 accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
MA_183150g0020 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
MA_9319878g0010 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Mp7g03210.1 No alias accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017929 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Sam_g39417 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Solyc03g096790.3.1 Solyc03g096790 accessory component ATG13 of ATG1-13 autophagosome... 0.04 OrthoFinder output from all 47 species
Solyc06g072980.4.1 Solyc06g072980 accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Tin_g01244 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Zm00001e009081_P002 Zm00001e009081 accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEA Interproscan
CC GO:1990316 Atg1/ULK1 kinase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR018731 Atg13_N 14 280
No external refs found!