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  5. Msp_g08006

Msp_g08006


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08006

Target Alias Description ECC score Gene Family Method Actions
Adi_g108732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.04 OrthoFinder output from all 47 species
Dcu_g10791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02923 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ehy_g03943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g35220.1 LOC_Os10g35220 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g04880.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Ore_g05810 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ore_g32260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00630 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 65 116
IPR004088 KH_dom_type_1 307 354
IPR004088 KH_dom_type_1 392 458
IPR004088 KH_dom_type_1 169 234
No external refs found!