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  5. Msp_g07900

Msp_g07900 (ATSCO1/CPEF-G, SCO1, ATSCO1)


Aliases : ATSCO1/CPEF-G, SCO1, ATSCO1

Description : translation elongation factor *(EF-G) & original description: none


Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00031690 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT1G62750 ATSCO1/CPEF-G,... Translation elongation factor EFG/EF2 protein 0.07 OrthoFinder output from all 47 species
Adi_g024951 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Ala_g02375 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Als_g15105 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Aob_g05315 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06164 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene31691.t1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Cba_g01251 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G106300.1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.16 OrthoFinder output from all 47 species
Cre02.g076250 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre11.g467553 No alias Elongation factor G, mitochondrial OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dac_g00996 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g08930 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01583 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01006035001 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.1 OrthoFinder output from all 47 species
Gb_36066 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.05 OrthoFinder output from all 47 species
LOC_Os04g45490.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Len_g12465 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Len_g18043 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.08 OrthoFinder output from all 47 species
Lfl_g02343 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Mp7g06620.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.04 OrthoFinder output from all 47 species
Nbi_g06861 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Ore_g06596 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Pir_g01363 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g15053 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002734 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Sam_g17251 No alias translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Smo143627 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc08g079180.3.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Spa_g05896 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Spa_g45621 ATSCO1/CPEF-G,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01189 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.11 OrthoFinder output from all 47 species
Zm00001e007402_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.07 OrthoFinder output from all 47 species
Zm00001e041325_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 411 478
IPR000640 EFG_V-like 688 774
IPR041095 EFG_II 491 564
IPR005517 Transl_elong_EFG/EF2_IV 566 684
IPR000795 T_Tr_GTP-bd_dom 97 368
No external refs found!