1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g07790

Msp_g07790 (HYP1, ATHYP1)


Aliases : HYP1, ATHYP1

Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07790
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
Aop_g01351 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.25 No alias CSC1-like protein ERD4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
GSVIVT01011464001 HYP1, ATHYP1 Solute transport.channels.OSCA calcium-permeable channel 0.04 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 191 349
IPR032880 Csc1/OSCA1-like_N 9 170
IPR003864 CSC1/OSCA1-like_7TM 360 626
No external refs found!