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  5. Msp_g07559

Msp_g07559


Description : component *(NDC80) of NDC80 outer kinetochore complex & original description: none


Gene families : OG0005714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005714_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07559

Target Alias Description ECC score Gene Family Method Actions
AT3G54630 No alias CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... 0.15 OrthoFinder output from all 47 species
Ala_g33371 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.06 OrthoFinder output from all 47 species
Als_g05052 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.07 OrthoFinder output from all 47 species
Aop_g08964 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.16 OrthoFinder output from all 47 species
Azfi_s0004.g008544 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.06 OrthoFinder output from all 47 species
Ceric.39G004100.1 Ceric.39G004100 component *(NDC80) of NDC80 outer kinetochore complex &... 0.12 OrthoFinder output from all 47 species
Ceric.39G004200.1 Ceric.39G004200 component *(NDC80) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021621.13 No alias Cell cycle.mitosis and meiosis.chromosome... 0.09 OrthoFinder output from all 47 species
Cre02.g098300 No alias Cell cycle.mitosis and meiosis.chromosome... 0.06 OrthoFinder output from all 47 species
Dcu_g10017 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.18 OrthoFinder output from all 47 species
Gb_08872 No alias component NDC80 of NDC80 outer kinetochore complex 0.13 OrthoFinder output from all 47 species
LOC_Os08g36490.1 LOC_Os08g36490 component NDC80 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species
MA_10432519g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Mp2g14660.1 No alias component NDC80 of NDC80 outer kinetochore complex 0.09 OrthoFinder output from all 47 species
Nbi_g11443 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.18 OrthoFinder output from all 47 species
Ppi_g12827 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009856 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Solyc01g104520.3.1 Solyc01g104520 component NDC80 of NDC80 outer kinetochore complex 0.09 OrthoFinder output from all 47 species
Solyc01g104570.4.1 Solyc01g104570 component NDC80 of NDC80 outer kinetochore complex 0.07 OrthoFinder output from all 47 species
Spa_g09422 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e003996_P001 Zm00001e003996 component NDC80 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 29 159
No external refs found!