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  5. Msp_g07241

Msp_g07241 (RPAC43, ATRPAC43)


Aliases : RPAC43, ATRPAC43

Description : component *(NRPC3) of RNA polymerase III complex & original description: none


Gene families : OG0005805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005805_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07241

Target Alias Description ECC score Gene Family Method Actions
Cba_g02020 RPAC43, ATRPAC43 component *(NRPC3) of RNA polymerase III complex &... 0.04 OrthoFinder output from all 47 species
MA_842965g0020 RPAC43, ATRPAC43 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g21330.1 RPAC43, ATRPAC43 DNA-directed RNA polymerases II, IV and V subunit 3... 0.02 OrthoFinder output from all 47 species
Nbi_g19933 RPAC43, ATRPAC43 component *(NRPC3) of RNA polymerase III complex &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR011263 DNA-dir_RNA_pol_RpoA/D/Rpb3 78 361
IPR011262 DNA-dir_RNA_pol_insert 110 253
No external refs found!