Smo56793 (PACid_15403639)


Aliases : PACid_15403639

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Encodes WRKY DNA-binding protein 26 (WRKY26). WRKY DNA-binding protein 26 (WRKY26) FUNCTIONS IN: sequence-specific DNA binding transcription factor activity INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription EXPRESSED IN: 10 plant structures EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657) BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 33 (TAIR:AT2G38470.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g27730.1 : 263.0


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo56793
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT2G04880 WRKY1, ZAP1, ATWRKY1 zinc-dependent activator protein-1 0.01 Gene family
AT2G30250 ATWRKY25, WRKY25 WRKY DNA-binding protein 25 0.02 Gene family
GSVIVT01015952001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01026965001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01027069001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os04g39570 Os04g0471700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os04g46060 Os04g0545000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os12g32250 Os12g0507300,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
MA_120969g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc05g012770.3.1 Solyc05g012770.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc12g014610.2.1 Solyc12g014610.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d047309 GRMZM2G171428 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 109 165
No external refs found!