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  5. Msp_g06952

Msp_g06952


Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06952
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 PG2,... Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00097920 ATRD22, RD22,... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G23760 JP630, PG3 BURP domain-containing protein 0.04 OrthoFinder output from all 47 species
AT1G70370 PG2 polygalacturonase 2 0.05 OrthoFinder output from all 47 species
Adi_g046811 PG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g075863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g075864 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g078179 PG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g078180 PG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g01862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25087 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12539 ATRD22, RD22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16938 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20411 PG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25890 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06653 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34468.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34471.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34476.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34479.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38555.t1 ATRD22, RD22,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G022300.1 ATRD22, RD22,... not classified & original description: pacid=50571560... 0.03 OrthoFinder output from all 47 species
Ceric.03G022400.1 ATRD22, RD22,... not classified & original description: pacid=50572685... 0.04 OrthoFinder output from all 47 species
Ceric.17G074900.1 PG2, Ceric.17G074900 not classified & original description: pacid=50618228... 0.03 OrthoFinder output from all 47 species
Dac_g09864 ATRD22, RD22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g16859 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10463 ATRD22, RD22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12782 PG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g13160 PG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g20107 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47581 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035686001 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01035703001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_39304 ATRD22, RD22 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os01g53240.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13240.1 PG1, LOC_Os06g13240 BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os08g29200.1 PG2, LOC_Os08g29200 non-catalytic polygalacturonase regulator 0.04 OrthoFinder output from all 47 species
LOC_Os08g38810.1 ATRD22, RD22,... BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os09g16010.1 PG2, LOC_Os09g16010 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
LOC_Os10g26940.1 PG2, LOC_Os10g26940 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
Len_g13687 ATRD22, RD22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g55574 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55608 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425868g0010 USPL1, ATUSPL1 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_10436065g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19057g0010 JP630, PG3 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
MA_203282g0010 No alias BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_462957g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_565982g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5913418g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_63321g0010 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_8888577g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12181 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29071 PG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g37368 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11148 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60183 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011800 ATRD22, RD22 not classified & original description: CDS=1-1551 0.04 OrthoFinder output from all 47 species
Solyc01g109500.4.1 USPL1, ATUSPL1,... BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g062300.3.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc02g062310.1.1 Solyc02g062310 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc05g005550.4.1 PG2, Solyc05g005550 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
Solyc08g068130.1.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Spa_g12000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12001 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g49176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15821 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20244 ATRD22, RD22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003438_P003 ATRD22, RD22,... Protein RAFTIN 1A OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Zm00001e003891_P006 Zm00001e003891 BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e019897_P001 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e029096_P002 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e033843_P001 PG2, Zm00001e033843 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 157 364
No external refs found!