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  5. Msp_g06839

Msp_g06839


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06839

Target Alias Description ECC score Gene Family Method Actions
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Ala_g07070 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11058 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18610 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25571 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g00927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01052 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.16G075200.1 RPD1, Ceric.16G075200 not classified & original description: pacid=50589258... 0.02 OrthoFinder output from all 47 species
Ceric.24G018700.1 Ceric.24G018700 not classified & original description: pacid=50629155... 0.03 OrthoFinder output from all 47 species
Dac_g00875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033438001 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g32540.1 LOC_Os02g32540 no description available(sp|q9zuz6|wtf9_arath : 134.0) 0.05 OrthoFinder output from all 47 species
LOC_Os06g15550.1 LOC_Os06g15550 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g58602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05427 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g15797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005187 No alias not classified & original description: CDS=1-1266 0.03 OrthoFinder output from all 47 species
Spa_g04531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g12440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22170 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e006573_P002 Zm00001e006573 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021099 PORR_domain 44 376
No external refs found!