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  5. Smo55113

Smo55113 (PACid_15418372)


Aliases : PACid_15418372

Description : 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP FASCICLIN-like arabinogalactan protein 8 (FLA8) LOCATED IN: anchored to plasma membrane, apoplast, plasma membrane, anchored to membrane, plant-type cell wall EXPRESSED IN: 24 plant structures EXPRESSED DURING: 14 growth stages CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782) BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan-protein 10 (TAIR:AT3G60900.1) Has 14155 Blast hits to 6880 proteins in 856 species: Archae - 79 Bacteria - 4506 Metazoa - 1333 Fungi - 788 Plants - 1999 Viruses - 868 Other Eukaryotes - 4582 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000779 (Gene family) Phylogenetic Tree(s): OG0000779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo55113
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G24450 FLA3 FASCICLIN-like arabinogalactan protein 3 precursor 0.03 Gene family
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.05 Gene family
AT3G60900 FLA10 FASCICLIN-like arabinogalactan-protein 10 0.02 Gene family
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.02 Gene family
GSVIVT01014684001 No alias 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP... 0.04 Gene family
GSVIVT01030085001 No alias No description available 0.04 Gene family
LOC_Os04g48490 Os04g0574200 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP... 0.02 Gene family
MA_55418g0010 No alias 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP... 0.03 Gene family
Solyc07g045440.1.1 Solyc07g045440.1 No description available 0.02 Gene family
Solyc10g005960.1.1 Solyc10g005960.1 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP... 0.04 Gene family
Zm00001d027471 GRMZM2G065718 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP... 0.04 Gene family
Zm00001d037540 GRMZM2G084812 10.5.1.1 cell wall.cell wall proteins.AGPs.AGP... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000782 FAS1_domain 175 304
No external refs found!