Msp_g06683


Description : component *(LSm6) of U6-associated LSm accessory ribonucleoprotein complex & original description: none


Gene families : OG0002787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002787_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06683

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g31950.1 LOC_Os04g31950 component LSm6 of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
Mp6g01610.1 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
Spa_g47726 RUXF component *(Sm-F) of U1/U2/U4/U5-associated Sm accessory... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045765 regulation of angiogenesis IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901342 regulation of vasculature development IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 26 90
No external refs found!