Msp_g06450 (CPN60B, LEN1)

Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: none

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g06450

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00185880	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
AT2G28000	CH-CPN60A, CPN60A, SLP	chaperonin-60alpha	0.03	OrthoFinder output from all 47 species
Ala_g02236	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G077900.1	CH-CPN60A,...	chaperone *(Hsp60) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G041900.1	CPN60B, LEN1,...	chaperone *(Hsp60) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g03882	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g08062	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g37829	No alias	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.05	OrthoFinder output from all 47 species
GSVIVT01017032001	No alias	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
GSVIVT01031526001	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
LOC_Os06g02380.2	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
LOC_Os12g17910.1	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
Len_g13340	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g28437	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10436772g0010	CH-CPN60A, CPN60A, SLP	chaperone (Hsp60)	0.02	OrthoFinder output from all 47 species
MA_587689g0010	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha...	0.02	OrthoFinder output from all 47 species
Mp5g20470.1	CH-CPN60A, CPN60A, SLP	subunit alpha of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
Nbi_g03062	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08643	No alias	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g15384	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c24_12180V3.1	CH-CPN60A,...	chaperonin-60alpha	0.02	OrthoFinder output from all 47 species
Ppi_g14667	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e029825_P001	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Zm00001e031536_P001	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	93	596

External Links

No external refs found!

Msp_g06450 (CPN60B, LEN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation