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Msp_g06322


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06322

Target Alias Description ECC score Gene Family Method Actions
Aop_g21088 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008001001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01038141001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os05g47900.1 LOC_Os05g47900 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g10613 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g091230.4.1 Solyc02g091230 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e017493_P001 Zm00001e017493 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 96 141
IPR022143 DUF3675 148 264
No external refs found!