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  5. Msp_g06264

Msp_g06264


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06264

Target Alias Description ECC score Gene Family Method Actions
AT3G06410 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
Adi_g061091 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Adi_g103383 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Als_g18759 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Als_g57552 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aop_g38684 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06086.t1 HUA1, Aspi01Gene06086 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G050900.1 Ceric.20G050900 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.34G043900.1 ZFN1, Ceric.34G043900 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03798 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ehy_g14501 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017774001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Len_g17303 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g16319 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Solyc06g054620.4.1 Solyc06g054620 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc11g008900.2.1 ZFN1, Solyc11g008900 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g08367 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 314 338
IPR000571 Znf_CCCH 121 146
IPR000571 Znf_CCCH 266 291
IPR000571 Znf_CCCH 75 98
IPR000571 Znf_CCCH 25 50
No external refs found!