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Description : not classified & original description: none
Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g05924 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G14340 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g16560 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g22163 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0137.g051018 | No alias | not classified & original description: CDS=148-852 | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19786 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_26630g0010 | No alias | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_371748g0010 | No alias | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57115 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 6 | 69 |
| No external refs found! |