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Msp_g05066 (ATGCN1, GCN1)


Aliases : ATGCN1, GCN1

Description : not classified & original description: none


Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05066

Target Alias Description ECC score Gene Family Method Actions
Mp6g18410.1 ATGCN1, GCN1 ABC transporter F family member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ppi_g18687 ATGCN1, GCN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g069090.2.1 ATGCN1, GCN1,... ABC transporter F family member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 285 361
IPR003439 ABC_transporter-like_ATP-bd 401 532
IPR003439 ABC_transporter-like_ATP-bd 91 246
No external refs found!