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  5. Msp_g04983

Msp_g04983


Description : not classified & original description: none


Gene families : OG0003453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04983

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00098340 evm_27.TU.AmTr_v1... Pathogen-related protein OS=Hordeum vulgare 0.03 OrthoFinder output from all 47 species
LOC_Os01g14590.1 LOC_Os01g14590 Pathogen-related protein OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53090.1 LOC_Os01g53090 Pathogen-related protein OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Pp3c11_19760V3.1 Pp3c11_19760 pathogenesis-related family protein 0.01 OrthoFinder output from all 47 species
Solyc04g064880.4.1 Solyc04g064880 Pathogen-related protein OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!