Aliases : SNX1, ATSNX1
Description : regulatory factor SNX1 of Retromer protein recycling complex & original description: none
Gene families : OG0003446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003446_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00113530 | SNX1, ATSNX1,... | Vesicle trafficking.endomembrane trafficking.protein... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g105073 | SNX1, ATSNX1 | regulatory factor SNX1 of Retromer protein recycling... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g04481 | SNX1, ATSNX1 | regulatory factor SNX1 of Retromer protein recycling... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G061300.1 | SNX1, ATSNX1,... | regulatory factor SNX1 of Retromer protein recycling... | 0.03 | OrthoFinder output from all 47 species | |
Len_g12657 | SNX1, ATSNX1 | regulatory factor SNX1 of Retromer protein recycling... | 0.03 | OrthoFinder output from all 47 species | |
Mp7g16810.1 | SNX1, ATSNX1 | component SNX1 of Retromer protein recycling complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0035091 | phosphatidylinositol binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005048 | signal sequence binding | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
MF | GO:0042277 | peptide binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0051235 | maintenance of location | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |