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  5. Msp_g04828

Msp_g04828


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04828

Target Alias Description ECC score Gene Family Method Actions
AT1G63630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g38904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.02 OrthoFinder output from all 47 species
Len_g24294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.02 OrthoFinder output from all 47 species
Tin_g19161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 126
IPR002885 Pentatricopeptide_repeat 8 56
IPR002885 Pentatricopeptide_repeat 145 174
No external refs found!