Msp_g04795


Description : not classified & original description: none


Gene families : OG0002586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002586_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04795

Target Alias Description ECC score Gene Family Method Actions
Aev_g05732 TCH3, ATCAL4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32875 CP1, ATCP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53742.t1 UNE14, Aspi01Gene53742 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30394 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03544 MSS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48934 UNE14 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g09491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g19720.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g13581 UNE14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g16520.1 TCH3, ATCAL4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g44730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g058720.4.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e038319_P001 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 106 132
IPR002048 EF_hand_dom 25 86
No external refs found!