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  5. Msp_g04615

Msp_g04615


Description : not classified & original description: none


Gene families : OG0003847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04615
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00051210 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G18810 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g011016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000492.83 No alias No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.7 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre01.g027850 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre06.g274650 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g15806 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g01471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021256001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_08986 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g13970.2 LOC_Os02g13970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10953 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g01848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10045090g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g11057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011931 No alias not classified & original description: CDS=112-1842 0.02 OrthoFinder output from all 47 species
Sam_g07871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo170011 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g072160.4.1 Solyc02g072160 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g09147 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g28117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e024909_P003 Zm00001e024909 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 135 210
IPR016040 NAD(P)-bd_dom 447 545
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 274 434
No external refs found!