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  5. Msp_g04568

Msp_g04568


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04568
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00139910 evm_27.TU.AmTr_v1... VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G43870 No alias Plant protein of unknown function (DUF828) with plant... 0.02 OrthoFinder output from all 47 species
Ala_g12666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018032001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035642001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_33098 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432316g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g11286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo268691 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g066860.2.1 Solyc08g066860 VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013666 PH_pln 378 482
IPR008546 VAN3-bd-like_auxin_canal 58 346
No external refs found!