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  5. Msp_g04489

Msp_g04489


Description : oleoyl-ACP thioesterase *(FATA) & original description: none


Gene families : OG0000593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04489
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00112300 FATB,... Palmitoyl-acyl carrier protein thioesterase,... 0.03 OrthoFinder output from all 47 species
AT4G13050 No alias Acyl-ACP thioesterase 0.02 OrthoFinder output from all 47 species
Aev_g39303 FATB palmitoyl-ACP thioesterase *(FatM) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19789 FATB not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07003 FaTA, AtFaTA oleoyl-ACP thioesterase *(FATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14631 FATB not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11657 FATB not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007903 No alias not classified & original description: CDS=757-2580 0.03 OrthoFinder output from all 47 species
Ceric.11G010500.1 FATB, Ceric.11G010500 not classified & original description: pacid=50595692... 0.05 OrthoFinder output from all 47 species
Dac_g39347 FATB not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01443 FATB not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015448001 FATB Lipid metabolism.fatty acid synthesis.fatty acid chain... 0.03 OrthoFinder output from all 47 species
Gb_21293 FATB palmitoyl-ACP thioesterase 0.03 OrthoFinder output from all 47 species
Gb_39975 FATB palmitoyl-ACP thioesterase 0.02 OrthoFinder output from all 47 species
Len_g00703 FATB not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10197220g0010 FATB palmitoyl-ACP thioesterase 0.04 OrthoFinder output from all 47 species
MA_783g0010 FATB Palmitoyl-acyl carrier protein thioesterase,... 0.05 OrthoFinder output from all 47 species
Mp2g10900.1 FATB palmitoyl-ACP thioesterase. palmitoyl-ACP thioesterase (FatM) 0.04 OrthoFinder output from all 47 species
Pp3c15_18050V3.1 FATB, Pp3c15_18050 fatty acyl-ACP thioesterases B 0.02 OrthoFinder output from all 47 species
Pp3c17_23790V3.1 FATB, Pp3c17_23790 fatty acyl-ACP thioesterases B 0.02 OrthoFinder output from all 47 species
Ppi_g02909 FaTA, AtFaTA oleoyl-ACP thioesterase *(FATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011238 FATB not classified & original description: CDS=988-2130 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015816 FaTA, AtFaTA oleoyl-ACP thioesterase *(FATA) & original description:... 0.04 OrthoFinder output from all 47 species
Smo103466 FATB Palmitoyl-acyl carrier protein thioesterase,... 0.04 OrthoFinder output from all 47 species
Smo444039 FaTA, AtFaTA Oleoyl-acyl carrier protein thioesterase 1,... 0.02 OrthoFinder output from all 47 species
Spa_g37352 No alias oleoyl-ACP thioesterase *(FATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29686 FATB not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009338_P001 FATB, Zm00001e009338 palmitoyl-ACP thioesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
MF GO:0016790 thiolester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002864 Acyl-ACP_thioesterase 209 490
No external refs found!