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  5. Msp_g04486

Msp_g04486


Description : not classified & original description: none


Gene families : OG0001281 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04486
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00161450 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G10020 No alias Protein of unknown function (DUF1005) 0.02 OrthoFinder output from all 47 species
Aspi01Gene27613.t1 Aspi01Gene27613 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51921.t1 Aspi01Gene51921 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39789 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_25897g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo111932 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc12g008600.2.1 Solyc12g008600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g16952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019865_P002 Zm00001e019865 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR010410 DUF1005 1 436
No external refs found!