Msp_g04437


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04437

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00220510 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00093260 SLO1,... Pentatricopeptide repeat-containing protein At2g22410,... 0.04 OrthoFinder output from all 47 species
AMTR_s00031p00067070 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Adi_g009542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034956 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38081 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05713 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06359 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g13814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15922 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.05 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.04 OrthoFinder output from all 47 species
Ceric.22G009800.1 Ceric.22G009800 not classified & original description: pacid=50615356... 0.06 OrthoFinder output from all 47 species
Dac_g05580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08500 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g21472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g39483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34152 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g48811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63512 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17397 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g55749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001817 No alias not classified & original description: CDS=1-3483 0.04 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g15480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21372 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g22905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32996 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g45601 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g21799 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 192 223
IPR002885 Pentatricopeptide_repeat 99 121
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 125 172
No external refs found!