Msp_g04292


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00220350 OTP85,... Pentatricopeptide repeat-containing protein At2g02980,... 0.05 OrthoFinder output from all 47 species
AMTR_s00067p00084570 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g117556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g17854 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14090.t1 Aspi01Gene14090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22419.t1 Aspi01Gene22419 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07157 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g45912 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76834 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.12G029700.1 Ceric.12G029700 not classified & original description: pacid=50601859... 0.04 OrthoFinder output from all 47 species
Ceric.36G012600.1 Ceric.36G012600 not classified & original description: pacid=50568766... 0.04 OrthoFinder output from all 47 species
Dac_g05578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08599 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42993 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47931 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50121 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
LOC_Os09g24680.1 LOC_Os09g24680 Pentatricopeptide repeat-containing protein At1g74600,... 0.06 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05404 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34131 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06624 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_122606g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27419 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021664 No alias not classified & original description: CDS=1-1812 0.04 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo111982 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc07g005850.3.1 Solyc07g005850 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 167 191
IPR002885 Pentatricopeptide_repeat 139 161
IPR002885 Pentatricopeptide_repeat 62 109
No external refs found!