Msp_g03890


Description : E3 ubiquitin ligase *(DRR1) & original description: none


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03890

Target Alias Description ECC score Gene Family Method Actions
AT4G26580 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01155 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21889 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene18426.t1 Aspi01Gene18426 E3 ubiquitin ligase *(DRR1) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g08695 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10536 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_26029 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g41409 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56731 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19199 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06262 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g015800.2.1 Solyc12g015800 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Tin_g13870 No alias E3 ubiquiTin ligase *(DRR1) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!