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  5. Msp_g03861

Msp_g03861 (PVA12)


Aliases : PVA12

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03861
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00163160 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g080054 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Adi_g088258 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Cba_g27802 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Cba_g32115 PVA12 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Cre03.g196900 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os08g05890.1 LOC_Os08g05890 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06020.1 PVA12, LOC_Os08g06020 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Len_g17263 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g078000.3.1 Solyc08g078000 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Spa_g06544 PVA12 contact site protein (VAP27) of... 0.08 OrthoFinder output from all 47 species
Tin_g02524 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.06 OrthoFinder output from all 47 species
Zm00001e021734_P002 PVA12, Zm00001e021734 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 41 144
No external refs found!