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  5. Msp_g03687

Msp_g03687 (ATG8F)


Aliases : ATG8F

Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03687
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT2G45170 ATG8E, ATATG8E AUTOPHAGY 8E 0.05 OrthoFinder output from all 47 species
Ala_g00497 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Als_g31042 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Aop_g00128 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G046800.1 ATG8F, Ceric.33G046800 autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g20595 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g05523 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ore_g05465 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g53060 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002602 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Spa_g02744 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Spa_g25476 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Spa_g46396 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e010463_P001 ATG8C, Zm00001e010463 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Zm00001e021618_P001 ATG8C, Zm00001e021618 ATG8 autophagosome ubiquitin-fold protein 0.01 OrthoFinder output from all 47 species
Zm00001e041680_P001 ATG8C, Zm00001e041680 ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 16 119
No external refs found!