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  5. Msp_g02863

Msp_g02863 (ATXIK, XI-17, XIK)


Aliases : ATXIK, XI-17, XIK

Description : class XI myosin microfilament-based motor protein & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g02863

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00234900 XI-15, ATXI-I,... Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
AT1G17580 ATMYA1, XI-1, MYA1 myosin 1 0.03 OrthoFinder output from all 47 species
AT3G58160 XI-16, MYA3,... P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g104758 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Aev_g28544 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Aev_g29146 ATXIE, XIE not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02712 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Aob_g14483 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011990 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023600 ATVIIIA, VIIIA not classified & original description: CDS=1-2967 0.04 OrthoFinder output from all 47 species
Ceric.12G036000.1 ATVIIIA, VIIIA,... class VIII myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
GSVIVT01034427001 ATVIIIA, VIIIA Cytoskeleton.microfilament network.myosin... 0.04 OrthoFinder output from all 47 species
GSVIVT01035479001 XI-15, ATXI-I, XI-I Cytoskeleton.microfilament network.myosin... 0.04 OrthoFinder output from all 47 species
LOC_Os03g48140.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Len_g01925 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Lfl_g27695 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
MA_10428972g0010 ATXIK, XI-17, XIK Myosin-11 OS=Arabidopsis thaliana (sp|f4hwy6|myo11_arath : 221.0) 0.03 OrthoFinder output from all 47 species
MA_10434653g0010 XI-15, ATXI-I, XI-I Protein OPAQUE1 OS=Zea mays (sp|k7u9n8|op1_maize : 399.0) 0.03 OrthoFinder output from all 47 species
MA_113402g0010 ATM1 Myosin-3 OS=Arabidopsis thaliana (sp|f4i507|myo3_arath : 305.0) 0.03 OrthoFinder output from all 47 species
Mp3g23480.1 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Nbi_g14081 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Nbi_g20512 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Zm00001e010552_P001 ATMYOS1, ATM4,... class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e019983_P001 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 840 859
IPR000048 IQ_motif_EF-hand-BS 744 762
IPR000048 IQ_motif_EF-hand-BS 766 785
IPR000048 IQ_motif_EF-hand-BS 792 811
IPR001609 Myosin_head_motor_dom 72 727
IPR002710 Dilute_dom 1358 1461
No external refs found!