Aliases : THO2, AtTHO2
Description : component *(THOC2/Tho2) of mRNP trafficking THO subcomplex & original description: none
Gene families : OG0003635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003635_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00138p00044110 | THO2, AtTHO2,... | RNA processing.messenger ribonucleoprotein particle... | 0.04 | OrthoFinder output from all 47 species | |
AT1G24706 | THO2, AtTHO2 | THO2 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g107430 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g08657 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Als_g01214 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g29810 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g07582 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene09828.t1 | THO2, AtTHO2,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene09832.t1 | THO2, AtTHO2,... | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001636.1 | THO2, AtTHO2 | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02056 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01011619001 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.03 | OrthoFinder output from all 47 species | |
Gb_33812 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
Len_g01408 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
MA_10430572g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.04 | OrthoFinder output from all 47 species | |
MA_10431208g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.05 | OrthoFinder output from all 47 species | |
Mp1g20320.1 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
Ore_g16129 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g04007 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0104.g020047 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
Smo173562 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g017890.4.1 | THO2, AtTHO2,... | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.05 | OrthoFinder output from all 47 species | |
Spa_g18725 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |