1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g01791

Msp_g01791


Description : component *(uL6) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001493_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01791

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00062300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Als_g62254 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001532.12 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre12.g494050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
LOC_Os02g01332.1 LOC_Os02g01332 component RPL9 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os09g31180.1 LOC_Os09g31180 component RPL9 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Len_g18159 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c14_8600V3.1 Pp3c14_8600 Ribosomal protein L6 family 0.01 OrthoFinder output from all 47 species
Sam_g11980 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc06g073310.3.1 Solyc06g073310 component RPL9 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g24089 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e025404_P001 Zm00001e025404 component RPL9 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e036699_P002 Zm00001e036699 component RPL9 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR020040 Ribosomal_L6_a/b-dom 109 177
IPR020040 Ribosomal_L6_a/b-dom 12 86
No external refs found!