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  5. Msp_g01675

Msp_g01675


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01675
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g082672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25758 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g18219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33935 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035389 No alias not classified & original description: CDS=1-2073 0.02 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.01 OrthoFinder output from all 47 species
Azfi_s0219.g058598 No alias not classified & original description: CDS=1-1215 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.01 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.01 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.01 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.01 OrthoFinder output from all 47 species
Cba_g07638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07705 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29993 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G072000.1 Ceric.02G072000 not classified & original description: pacid=50584704... 0.02 OrthoFinder output from all 47 species
Ceric.04G104800.1 Ceric.04G104800 not classified & original description: pacid=50632059... 0.03 OrthoFinder output from all 47 species
Ceric.13G012100.1 VAC1, ECB2,... not classified & original description: pacid=50635600... 0.02 OrthoFinder output from all 47 species
Ceric.1Z015700.1 VAC1, ECB2,... not classified & original description: pacid=50604577... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.01 OrthoFinder output from all 47 species
Dde_g26328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13073 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13947 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05155 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41079 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 243
IPR002885 Pentatricopeptide_repeat 95 142
IPR002885 Pentatricopeptide_repeat 545 589
IPR002885 Pentatricopeptide_repeat 312 360
IPR002885 Pentatricopeptide_repeat 662 689
IPR002885 Pentatricopeptide_repeat 168 194
IPR002885 Pentatricopeptide_repeat 634 655
IPR002885 Pentatricopeptide_repeat 430 458
IPR046848 E_motif 877 911
No external refs found!