Smo446995 (PACid_15404009)


Aliases : PACid_15404009

Description : 35.1 not assigned.no ontology RmlC-like cupins superfamily protein FUNCTIONS IN: calmodulin binding INVOLVED IN: biological_process unknown LOCATED IN: plasma membrane EXPRESSED IN: stem, flower CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829) BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1) Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66 Bacteria - 4603 Metazoa - 71 Fungi - 219 Plants - 125 Viruses - 0 Other Eukaryotes - 2273 (source: NCBI BLink). & (chl4|511990 : 237.0


Gene families : OG_01_0001641 (Gene family) Phylogenetic Tree(s): OG0001641_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo446995
Cluster HCCA cluster: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT2G43120 No alias RmlC-like cupins superfamily protein 0.05 Gene family
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.02 Gene family
Cpa|evm.model.tig00020610.65 No alias 35.1 not assigned.no ontology RmlC-like cupins... 0.01 Gene family
Cre16.g674964 No alias 35.1 not assigned.no ontology RmlC-like cupins... 0.02 Gene family
GSVIVT01031671001 No alias 35.1 not assigned.no ontology RmlC-like cupins... 0.02 Gene family
Zm00001d032363 GRMZM2G101116 35.1 not assigned.no ontology RmlC-like cupins... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 26 119
No external refs found!