Aliases : ATNAP1, ATABC1, ABC1, LAF6
Description : component *(SUF-B) of plastidial SUF system assembly phase & original description: none
Gene families : OG0003465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003465_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g00614 | |
Cluster | HCCA: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g113695 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.03 | OrthoFinder output from all 47 species | |
Als_g33257 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0045.g029822 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G058200.1 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g07409 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012742001 | ATNAP1, ATABC1,... | UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g03265 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g16641 | ATNAP1, ATABC1,... | component *(SUF-B) of plastidial SUF system assembly... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g080440.3.1 | ATNAP1, ATABC1,... | component SUF-B of plastidial SUF system assembly phase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019397_P001 | ATNAP1, ATABC1,... | component SUF-B of plastidial SUF system assembly phase | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016226 | iron-sulfur cluster assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
MF | GO:0004602 | glutathione peroxidase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |