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  5. Msp_g00479

Msp_g00479 (SYP43, ATSYP43)


Aliases : SYP43, ATSYP43

Description : Qa-type SYP4-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0004092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00479
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT3G05710 SYP43, ATSYP43 syntaxin of plants 43 0.03 OrthoFinder output from all 47 species
Cre12.g507450 ATSYP41, ATTLG2A, SYP41 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 265 317
No external refs found!