Msp_g00336

Description : mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP trafficking complex & original description: none

Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g00336

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00163740	ALY4,...	RNA processing.messenger ribonucleoprotein particle...	0.02	OrthoFinder output from all 47 species
Azfi_s0063.g035313	RBP-DR1, AtRBP-DR1	not classified & original description: CDS=1-591	0.04	OrthoFinder output from all 47 species
Mp2g07590.1	No alias	mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP...	0.02	OrthoFinder output from all 47 species
Ore_g27538	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025715	FoP_C	198	254
IPR000504	RRM_dom	105	173

External Links

No external refs found!