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  5. Tin_g46348

Tin_g46348


Description : not classified & original description: none


Gene families : OG0003132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g46348

Target Alias Description ECC score Gene Family Method Actions
Adi_g087869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21557 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70302 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g70303 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ceric.10G012600.1 Ceric.10G012600 not classified & original description: pacid=50612860... 0.02 OrthoFinder output from all 47 species
Ceric.13G096900.1 Ceric.13G096900 not classified & original description: pacid=50636239... 0.06 OrthoFinder output from all 47 species
Dde_g47761 No alias not classified & original description: none 0.24 OrthoFinder output from all 47 species
Dde_g47869 No alias not classified & original description: none 0.23 OrthoFinder output from all 47 species
Len_g13229 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g58541 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Msp_g42321 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g14392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29030 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g29724 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Nbi_g30059 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Ore_g23148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13115 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Smo115290 MEE23, EDA28 No description available 0.06 OrthoFinder output from all 47 species
Smo138860 No alias No description available 0.06 OrthoFinder output from all 47 species
Smo233866 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo410687 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo410688 No alias No description available 0.06 OrthoFinder output from all 47 species
Smo78233 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g48498 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Spa_g48534 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 225 368
IPR012951 BBE 650 689
No external refs found!