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Description : XRN4-exoribonuclease cofactor *(LARP1) & original description: none
Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g107381 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02674 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04484 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26663 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g02092 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene62010.t2 | Aspi01Gene62010 | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13843 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G060800.1 | Ceric.29G060800 | not classified & original description: pacid=50624742... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.29G061100.1 | Ceric.29G061100 | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g05816 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07929 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01006333001 | No alias | La-related protein 1C OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04152 | No alias | La-related protein 1C OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28833 | No alias | XRN4-exoribonuclease cofactor (LARP1) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07864 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15347 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g02402 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10955 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0087.g018459 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g061980.3.1 | Solyc02g061980 | La-related protein 1C OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g073550.3.1 | Solyc06g073550 | XRN4-exoribonuclease cofactor (LARP1) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g30705 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000120 | RNA polymerase I transcription regulator complex | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003689 | DNA clamp loader activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005663 | DNA replication factor C complex | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006630 | La_HTH | 534 | 590 |
| No external refs found! |