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  5. Tin_g45950

Tin_g45950


Description : nucleocytoplasmic transport karyopherin *(XPO4) & original description: none


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45950

Target Alias Description ECC score Gene Family Method Actions
Aev_g07994 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species
Als_g12362 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33710.1 LOC_Os10g33710 XPO4 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species
Lfl_g36174 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.04 OrthoFinder output from all 47 species
Mp6g21410.1 No alias XPO4 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Ppi_g59351 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species
Smo406082 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Solyc12g027580.3.1 Solyc12g027580 XPO4 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species
Zm00001e004578_P001 Zm00001e004578 XPO4 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR014877 XPO1_C_dom 966 1048
No external refs found!