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  5. Tin_g45756

Tin_g45756


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45756
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.02 OrthoFinder output from all 47 species
Ala_g04281 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20236 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02423 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G051000.1 Ceric.14G051000 histone *(H3) & original description: pacid=50634481... 0.02 OrthoFinder output from all 47 species
Ceric.14G051400.1 Ceric.14G051400 histone *(H3) & original description: pacid=50634480... 0.04 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.04 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.04 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.39 No alias Cell cycle.mitosis and meiosis.chromosome... 0.01 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Dac_g04344 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01902 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.05 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.02 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05015 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06032 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20676 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26206 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432805g0020 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.02 OrthoFinder output from all 47 species
Mp3g11410.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05547 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07788 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07789 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04217 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202 No alias not classified & original description: CDS=224-661 0.02 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc11g010230.2.1 Solyc11g010230 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e014760_P001 Zm00001e014760 histone (H3) 0.03 OrthoFinder output from all 47 species
Zm00001e018263_P001 Zm00001e018263 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e029901_P001 Zm00001e029901 histone (H3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 114
No external refs found!