Aliases : PACid_15419040
Description : 29.2.1.2.2.11 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L11 Ribosomal L5P family protein FUNCTIONS IN: structural constituent of ribosome INVOLVED IN: translation LOCATED IN: cytosolic large ribosomal subunit, vacuole EXPRESSED IN: male gametophyte, leaf CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928) BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1) Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312 Bacteria - 5083 Metazoa - 254 Fungi - 163 Plants - 278 Viruses - 0 Other Eukaryotes - 1764 (source: NCBI BLink). & (chl4|511164 : 261.0
Gene families : OG_01_0001235 (Gene family) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Smo444767 | |
Cluster | HCCA cluster: Cluster_109 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G42740 | RPL16A | ribosomal protein large subunit 16A | 0.07 | Gene family | |
AT3G58700 | No alias | Ribosomal L5P family protein | 0.23 | Gene family | |
AT4G18730 | RPL16B | ribosomal protein L16B | 0.27 | Gene family | |
AT5G45775 | No alias | Ribosomal L5P family protein | 0.33 | Gene family | |
Cpa|evm.model.tig00020610.38 | No alias | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.13 | Gene family | |
Cre01.g027000 | No alias | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.22 | Gene family | |
GSVIVT01020743001 | No alias | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.19 | Gene family | |
GSVIVT01021244001 | No alias | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.19 | Gene family | |
LOC_Os01g10820 | Os01g0205500 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.19 | Gene family | |
LOC_Os05g11710 | Os05g0207300 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.22 | Gene family | |
LOC_Os06g35730 | Os06g0550000 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.14 | Gene family | |
MA_74060g0010 | No alias | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.04 | Gene family | |
MA_86694g0010 | No alias | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.1 | Gene family | |
Solyc02g086240.3.1 | Solyc02g086240.3 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.24 | Gene family | |
Solyc10g007970.2.1 | Solyc10g007970.2 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.19 | Gene family | |
Solyc12g010930.2.1 | Solyc12g010930.2 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.26 | Gene family | |
Zm00001d010016 | GRMZM5G813584 | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.22 | Gene family | |
Zm00001d016200 | GRMZM2G014444 | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.2 | Gene family | |
Zm00001d046317 | GRMZM2G001816 | 29.2.1.2.2.16 protein.synthesis.ribosomal... | 0.25 | Gene family | |
Zm00001d053547 | GRMZM2G018770 | 29.2.1.2.2.11 protein.synthesis.ribosomal... | 0.25 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR031309 | Ribosomal_L5_C | 63 | 161 |
No external refs found! |