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  5. Tin_g45010

Tin_g45010


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45010

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07187 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15632 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55307 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21763 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30688 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07705 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19873 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G072000.1 Ceric.02G072000 not classified & original description: pacid=50584704... 0.04 OrthoFinder output from all 47 species
Ceric.05G023000.1 CRR22, Ceric.05G023000 not classified & original description: pacid=50579054... 0.03 OrthoFinder output from all 47 species
Ceric.06G051200.1 CRR22, Ceric.06G051200 not classified & original description: pacid=50620844... 0.04 OrthoFinder output from all 47 species
Ceric.09G005800.1 CRR22, Ceric.09G005800 not classified & original description: pacid=50588191... 0.04 OrthoFinder output from all 47 species
Ceric.11G019200.1 Ceric.11G019200 not classified & original description: pacid=50596467... 0.04 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G054700.1 Ceric.20G054700 not classified & original description: pacid=50567573... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g09663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33753 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06184 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32917 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21288 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 646 669
IPR002885 Pentatricopeptide_repeat 443 470
IPR002885 Pentatricopeptide_repeat 181 208
IPR002885 Pentatricopeptide_repeat 812 833
IPR002885 Pentatricopeptide_repeat 558 602
IPR002885 Pentatricopeptide_repeat 672 716
IPR002885 Pentatricopeptide_repeat 108 154
IPR002885 Pentatricopeptide_repeat 210 256
IPR002885 Pentatricopeptide_repeat 325 373
IPR046848 E_motif 889 934
No external refs found!