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  5. Tin_g44773

Tin_g44773 (SDE3)


Aliases : SDE3

Description : not classified & original description: none


Gene families : OG0002062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44773

Target Alias Description ECC score Gene Family Method Actions
Aop_g14011 MAA3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G049000.1 Ceric.04G049000 not classified & original description: pacid=50632510... 0.05 OrthoFinder output from all 47 species
Ceric.04G049100.1 SDE3, Ceric.04G049100 not classified & original description: pacid=50630575... 0.04 OrthoFinder output from all 47 species
Ceric.04G049400.1 SDE3, Ceric.04G049400 not classified & original description: pacid=50631292... 0.03 OrthoFinder output from all 47 species
Dac_g23614 SDE3 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g25530 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g27629 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g31900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_874070g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g23408 SDE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1057 1257
IPR041677 DNA2/NAM7_AAA_11 606 1046
IPR046439 ZF_RZ_dom 1853 1905
No external refs found!