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  5. Tin_g44662

Tin_g44662 (TEL1)


Aliases : TEL1

Description : not classified & original description: none


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44662
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.04 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.04 OrthoFinder output from all 47 species
AT3G26120 TEL1 terminal EAR1-like 1 0.03 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.04 OrthoFinder output from all 47 species
Aop_g04610 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40898.t1 TEL1, Aspi01Gene40898 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54244.t1 TEL1, Aspi01Gene54244 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042632 TEL1 not classified & original description: CDS=1-3177 0.04 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.06 OrthoFinder output from all 47 species
Dac_g14075 TEL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20398 TEL1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01003988001 TEL1 Protein terminal ear1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
GSVIVT01024201001 MCT2 Protein terminal ear1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Gb_21853 TEL1 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.06 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_68449g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp1g04100.1 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006958 TEL1 not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008917 TEL1 not classified & original description: CDS=1-2472 0.05 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.06 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Spa_g39479 TEL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 714 822
IPR000504 RRM_dom 474 537
No external refs found!