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  5. Tin_g44609

Tin_g44609


Description : not classified & original description: none


Gene families : OG0000471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000471_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44609
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00179370 evm_27.TU.AmTr_v1... Uncharacterized protein At1g28695 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G28700 No alias Nucleotide-diphospho-sugar transferase family protein 0.02 OrthoFinder output from all 47 species
Ala_g09684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G039200.1 Ceric.17G039200 not classified & original description: pacid=50617606... 0.03 OrthoFinder output from all 47 species
Dcu_g12284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_31868 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g46120.1 LOC_Os02g46120 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_140045g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_453470g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_501889g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_955315g0010 No alias Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g05697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028449_P001 Zm00001e028449 Uncharacterized protein At4g15970 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 134 335
No external refs found!