Tin_g44536 (MCM2, ATMCM2)

Aliases : MCM2, ATMCM2

Description : component *(MCM2) of MCM replicative DNA helicase complex & original description: none

Gene families : OG0004206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004206_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g44536
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00242770	MCM2, ATMCM2,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.1	OrthoFinder output from all 47 species
AT1G44900	MCM2, ATMCM2	minichromosome maintenance (MCM2/3/5) family protein	0.11	OrthoFinder output from all 47 species
Aev_g18657	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ala_g28049	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.11	OrthoFinder output from all 47 species
Als_g05684	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Als_g06371	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Aop_g09602	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.15	OrthoFinder output from all 47 species
Aspi01Gene05001.t1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Aspi01Gene10831.t1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Azfi_s0207.g057897	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Ceric.10G002200.1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.18	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.77	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Cre07.g338000	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.08	OrthoFinder output from all 47 species
Dac_g07583	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Dcu_g07094	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Ehy_g18175	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
GSVIVT01001119001	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.13	OrthoFinder output from all 47 species
Gb_10893	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.11	OrthoFinder output from all 47 species
LOC_Os11g29380.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.07	OrthoFinder output from all 47 species
Len_g09187	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Lfl_g39064	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
MA_10431703g0010	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Oryza sativa...	0.1	OrthoFinder output from all 47 species
Mp3g00130.1	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.14	OrthoFinder output from all 47 species
Msp_g13902	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Nbi_g03122	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.15	OrthoFinder output from all 47 species
Ppi_g15758	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023976	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Sam_g04440	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g14285	No alias	component *(MCM2) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Solyc11g040120.3.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.09	OrthoFinder output from all 47 species
Spa_g05361	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.21	OrthoFinder output from all 47 species
Zm00001e021446_P001	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010639	negative regulation of organelle organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032780	negative regulation of ATP-dependent activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042555	MCM complex	IEA	Interproscan
BP	GO:0043086	negative regulation of catalytic activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043462	regulation of ATP-dependent activity	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051095	regulation of helicase activity	None	Extended
BP	GO:0051097	negative regulation of helicase activity	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1905462	regulation of DNA duplex unwinding	None	Extended
BP	GO:1905463	negative regulation of DNA duplex unwinding	None	Extended
BP	GO:1905774	regulation of DNA helicase activity	None	Extended
BP	GO:1905775	negative regulation of DNA helicase activity	IEA	Interproscan
BP	GO:2001251	negative regulation of chromosome organization	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0031390	Ctf18 RFC-like complex	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033762	MCM_OB	385	512
IPR041562	MCM_lid	810	894
IPR027925	MCM_N	286	379
IPR001208	MCM_dom	553	775
IPR008045	MCM2	129	259

External Links

No external refs found!

Tin_g44536 (MCM2, ATMCM2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation