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  5. Tin_g44285

Tin_g44285 (TIL1, POL2A, ABO4,...)


Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529

Description : catalytic component *(POL2/POLE1) of DNA polymerase epsilon complex & original description: none


Gene families : OG0005358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44285
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.12 OrthoFinder output from all 47 species
AMTR_s00040p00177210 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.11 OrthoFinder output from all 47 species
AT1G08260 TIL1, POL2A,... DNA polymerase epsilon catalytic subunit 0.03 OrthoFinder output from all 47 species
Als_g16530 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.1 OrthoFinder output from all 47 species
Ceric.10G003400.1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.30 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.31 TIL2, POL2B DNA polymerase epsilon catalytic subunit A... 0.02 OrthoFinder output from all 47 species
Cre03.g179961 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
Dac_g06701 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.14 OrthoFinder output from all 47 species
Dcu_g42121 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.17 OrthoFinder output from all 47 species
Gb_06608 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.11 OrthoFinder output from all 47 species
LOC_Os02g30800.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.08 OrthoFinder output from all 47 species
Len_g09288 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.06 OrthoFinder output from all 47 species
Lfl_g39596 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.03 OrthoFinder output from all 47 species
MA_10433902g0010 TIL1, POL2A,... DNA polymerase epsilon catalytic subunit A... 0.06 OrthoFinder output from all 47 species
MA_80165g0010 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 OrthoFinder output from all 47 species
MA_88369g0010 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.09 OrthoFinder output from all 47 species
Msp_g32528 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
Nbi_g08627 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.2 OrthoFinder output from all 47 species
Solyc11g067140.2.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.02 OrthoFinder output from all 47 species
Spa_g06995 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.15 OrthoFinder output from all 47 species
Zm00001e014636_P002 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR013697 DNA_pol_e_suA_C 1584 1943
IPR006133 DNA-dir_DNA_pol_B_exonuc 109 439
IPR006134 DNA-dir_DNA_pol_B_multi_dom 805 1096
No external refs found!